Entry
Name
sn-glycerol-1-phosphate dehydrogenase;
glycerol-1-phosphate dehydrogenase [NAD(P)+];
sn-glycerol-1-phosphate:NAD+ oxidoreductase;
G-1-P dehydrogenase;
Gro1PDH;
AraM
Class
Oxidoreductases;
Acting on the CH-OH group of donors;
With NAD+ or NADP+ as acceptor
BRITE hierarchy
Sysname
sn-glycerol-1-phosphate:NAD(P)+ 2-oxidoreductase
Reaction(IUBMB)
sn-glycerol 1-phosphate + NAD(P)+ = glycerone phosphate + NAD(P)H + H+ [RN:
R05679 R05680 ]
Reaction(KEGG)
Substrate
Product
Comment
This enzyme is found primarily as a Zn2+-dependent form in archaea but a Ni2+-dependent form has been found in Gram-positive bacteria [6]. The Zn2+-dependent metalloenzyme is responsible for the formation of archaea-specific sn-glycerol-1-phosphate, the first step in the biosynthesis of polar lipids in archaea. It is the enantiomer of sn-glycerol 3-phosphate, the form of glycerophosphate found in bacteria and eukaryotes. The other enzymes involved in the biosynthesis of polar lipids in archaea are EC
2.5.1.41 (phosphoglycerol geranylgeranyltransferase) and EC
2.5.1.42 (geranylgeranylglycerol-phosphate geranylgeranyltransferase), which together alkylate the hydroxy groups of glycerol 1-phosphate to give unsaturated archaetidic acid, which is acted upon by EC
2.7.7.67 (CDP-archaeol synthase) to form CDP-unsaturated archaeol. The final step in the pathway involves the addition of L-serine, with concomitant removal of CMP, leading to the production of unsaturated archaetidylserine [4]. Activity of the enzyme is stimulated by K+ [2].
History
EC 1.1.1.261 created 2000, modified 2009
Pathway
ec00564 Glycerophospholipid metabolism
ec01110 Biosynthesis of secondary metabolites
Orthology
K00096 glycerol-1-phosphate dehydrogenase [NAD(P)+]
Genes
ERW : ERWE_CDS_08850(egsA)
ERG : ERGA_CDS_08770(egsA)
NOH : G5V57_01505 G5V57_09365 G5V57_15275
HTQ : FRZ44_02850 FRZ44_49650
HADH : FRZ61_03240 FRZ61_10520 FRZ61_43480 FRZ61_48200
ELUT : CKA38_05555 CKA38_06640 CKA38_10470
TMV : OH491_06105 OH491_17845 OH491_17965
PLH : VT85_15600(egsA_1) VT85_15630(egsA_2)
AGV : OJF2_68710(egsA_1) OJF2_71810(egsA_2)
ACOU : A5CBH24_04870 A5CBH24_16100
APUT : L6V35_00625 L6V35_09655
BLI : BL00250 BL00349(araM)
BLD : BLi03025(araM) BLi04259
BLH : BaLi_c31060(araM) BaLi_c42500
BAZ : BAMTA208_14130(araM)
BSON : S101395_01473(araM) S101395_04973
CSPG : LS684_11075 LS684_21690
BLEN : NCTC4824_03251(egsA) NCTC4824_03619(araM)
BBEV : BBEV_1649(egsA-1) BBEV_2998(egsA-2)
DOM : RRU94_11695 RRU94_24535
AHAL : FTX54_004510 FTX54_005775
PARG : PspKH34_21270(egsA)
AAYD : B379_00095 B379_15715
GYM : GYMC10_0789 GYMC10_1642
PPQ : PPSQR21_017380(gldA)
PSTE : PSTEL_04720 PSTEL_19935
POW : IJ21_26220 IJ21_37900
PIB : BBD41_06660 BBD41_10845
PVO : PVOR_06240 PVOR_10374
PMAE : LMZ02_03330 LMZ02_27615
PGLU : A3958_13095 A3958_16805
PAUB : PUR_07550 PUR_15030(egsA)
KEB : GXN75_02510 GXN75_05345
CBE : Cbei_2364 Cbei_2501 Cbei_4092
CBZ : Cbs_2364 Cbs_2501 Cbs_4092
CBEI : LF65_03028 LF65_03168 LF65_04603 LF65_05127
CSB : CLSA_c14810(egsA1) CLSA_c18080(egsA2)
CEU : A7L45_08600 A7L45_11055
CDY : F3K33_12100 F3K33_12780 F3K33_20935 F3K33_23355
CIU : G4D55_04920 G4D55_20630
CSS : Cst_c15320(egsA1) Cst_c16390(egsA2) Cst_c16420(egsA3)
CSD : Clst_1479 Clst_1581 Clst_1584
PFAA : MM59RIKEN_13350 MM59RIKEN_16280 MM59RIKEN_16460 MM59RIKEN_27600
ELM : ELI_0163 ELI_1367 ELI_1846 ELI_3921
EMT : CPZ25_000290 CPZ25_010030 CPZ25_014105
ELIM : B2M23_04035 B2M23_06995 B2M23_10640 B2M23_16190
BPRO : PMF13cell1_01613(egsA_1) PMF13cell1_01615(egsA_2) PMF13cell1_03987(egsA_3)
BLAR : LC508_04460 LC508_19450 LC508_19460
BCOC : BLCOC_00520 BLCOC_00540 BLCOC_29370(egsA)
BHV : BLHYD_10830(egsA) BLHYD_32560
ARF : AR1Y2_0659 AR1Y2_1041 AR1Y2_2528 AR1Y2_2531 AR1Y2_3526
ACAC : EYQ97_00145 EYQ97_05265 EYQ97_05275 EYQ97_09090 EYQ97_12040 EYQ97_13590
ACHT : bsdcttw_29100 bsdcttw_48550
CMIU : B1H56_02575 B1H56_07925
PUF : UFO1_0314 UFO1_3934 UFO1_4506
PFT : JBW_00972 JBW_03322 JBW_04321
PFAC : PFJ30894_01576(egsA)
ERB : A4V01_02000 A4V01_06395
CKN : Calkro_0375 Calkro_1851
SCO : SCO2598(SCC88.09c) SCO6754(SC6A5.03)
SHO : SHJGH_3856 SHJGH_7406
SLV : SLIV_04745 SLIV_24685
SCW : TU94_11240 TU94_29045
SAMB : SAM23877_2647 SAM23877_6404
SLE : sle_10610(sle_10610) sle_46390(sle_46390)
SPLU : LK06_009785 LK06_028565
STRD : NI25_04665 NI25_26040
SAST : CD934_03310 CD934_22310
SSPO : DDQ41_14995 DDQ41_28485
SGF : HEP81_01178 HEP81_05188
SSEO : D0Z67_09405 D0Z67_24775
SPAC : B1H29_05480 B1H29_24490
SXT : KPP03845_106134(egsA)
SDRZ : NEH16_03385 NEH16_21465
SARG : HKX69_04560 HKX69_23050
SLAI : P8A22_04120 P8A22_26345
STRW : QHG49_06055 QHG49_23280
SCAT : P8A18_10055 P8A18_30490
PAK : HMPREF0675_4553 HMPREF0675_5398
PAV : TIA2EST22_07460 TIA2EST22_11490
PAX : TIA2EST36_07445 TIA2EST36_11350
PAZ : TIA2EST2_07370 TIA2EST2_11295
PAW : PAZ_c15740(egsA1) PAZ_c24190(egsA2)
PAD : TIIST44_00430 TIIST44_04415
PCN : TIB1ST10_07650 TIB1ST10_11815
PACC : PAC1_07835 PAC1_11840
PACH : PAGK_0690 PAGK_2228
PACN : TIA1EST1_07465 TIA1EST1_11430
CACN : RN83_00220 RN83_07905
PRL : BCB70_06760 BCB70_10980
PAUS : NCTC13651_02066(egsA)
PPC : HMPREF9154_1854 HMPREF9154_2330
ARUB : J5A65_04245 J5A65_06375
PBO : PACID_11470 PACID_21800
AACI : ASQ49_10985 ASQ49_15455
ACIJ : JS278_01311(egsA_1) JS278_02177(egsA_2)
ASIC : Q0Z83_054040 Q0Z83_089270
ACTT : DDD63_03800 DDD63_09715
ASLA : NCTC11923_00045(egsA)
FSL : EJO69_06470 EJO69_06605
RRD : RradSPS_2472 RradSPS_3030
RMAR : GBA65_01620 GBA65_18045
AVE : Arcve_0518 Arcve_0845
MJK : N2V74_01170 N2V74_04690
TVO : TVG1288826(TVG1288826)
SACR : SacRon12I_03095(egsA)
AMAN : B6F84_04640 B6F84_08190
ABRI : DFR85_02805 DFR85_07315 DFR85_15210
VSO : Vsou_05140 Vsou_21130
» show all
Taxonomy
Reference
Authors
Nishihara M, Koga Y
Title
sn-glycerol-1-phosphate dehydrogenase in Methanobacterium thermoautotrophicum: key enzyme in biosynthesis of the enantiomeric glycerophosphate backbone of ether phospholipids of archaebacteria.
Journal
Reference
Authors
Nishihara M, Koga Y
Title
Purification and properties of sn-glycerol-1-phosphate dehydrogenase from Methanobacterium thermoautotrophicum: characterization of the biosynthetic enzyme for the enantiomeric glycerophosphate backbone of ether polar lipids of Archaea.
Journal
Sequence
Reference
Authors
Koga Y, Kyuragi T, Nishihara M, Sone N
Title
Did archaeal and bacterial cells arise independently from noncellular precursors? A hypothesis stating that the advent of membrane phospholipid with enantiomeric glycerophosphate backbones caused the separation of the two lines of descent.
Journal
Sequence
Reference
Authors
Morii H, Nishihara M, Koga Y
Title
CTP:2,3-di-O-geranylgeranyl-sn-glycero-1-phosphate cytidyltransferase in the methanogenic archaeon Methanothermobacter thermoautotrophicus.
Journal
Reference
Authors
Han JS, Ishikawa K
Title
Active site of Zn(2+)-dependent sn-glycerol-1-phosphate dehydrogenase from Aeropyrum pernix K1.
Journal
Sequence
Reference
Authors
Guldan H, Sterner R, Babinger P
Title
Identification and characterization of a bacterial glycerol-1-phosphate dehydrogenase: Ni(2+)-dependent AraM from Bacillus subtilis.
Journal
Sequence
Other DBs
ExPASy - ENZYME nomenclature database: 1.1.1.261
LinkDB
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