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@sib-swiss

SIB Swiss Institute of Bioinformatics

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  1. training-collection training-collection Public

    Collection of bioinformatics training materials

    Python 1k 183

  2. single-cell-training single-cell-training Public

    SIB course on single cell transcriptomics by mostly using the Seurat pipeline

    R 82 36

  3. intermediate-python-training intermediate-python-training Public

    Jupyter Notebook 66 29

  4. first-steps-with-python-training first-steps-with-python-training Public

    repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training

    Jupyter Notebook 59 17

  5. intro-machine-learning-training intro-machine-learning-training Public

    Jupyter Notebook 46 15

  6. first-steps-with-R-training first-steps-with-R-training Public

    repository of the 2-day course "First steps with R in Life Sciences" from SIB-training

    R 46 12

Repositories

Showing 10 of 131 repositories
  • course-report Public
    sib-swiss/course-report’s past year of commit activity
    R 0 0 0 0 Updated Apr 15, 2025
  • sequencing-data-analysis-training Public

    SIB course that introduces analysis of NGS data

    sib-swiss/sequencing-data-analysis-training’s past year of commit activity
    Shell 16 CC-BY-4.0 13 4 0 Updated Apr 15, 2025
  • containers-snakemake-training Public Forked from sib-swiss/containers-introduction-training

    Course website "Introduction to Containers and Snakemake for Reproducible Research"

    sib-swiss/containers-snakemake-training’s past year of commit activity
    Dockerfile 5 CC-BY-4.0 14 0 0 Updated Apr 15, 2025
  • ds-package-creator Public

    Split a R package into a "client" and "server" version , datashield ready.

    sib-swiss/ds-package-creator’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Apr 14, 2025
  • glittr-stats Public

    General statistics of Glittr.org. Comes with the manuscript.

    sib-swiss/glittr-stats’s past year of commit activity
    PostScript 1 0 0 0 Updated Apr 14, 2025
  • kgsteward Public

    Knowledge Graph Steward - Command line tool to help manage RDF store

    sib-swiss/kgsteward’s past year of commit activity
    Python 6 GPL-3.0 2 0 0 Updated Apr 14, 2025
  • training-collection Public

    Collection of bioinformatics training materials

    sib-swiss/training-collection’s past year of commit activity
    Python 1,016 183 1 0 Updated Apr 13, 2025
  • single-cell-python-training Public
    sib-swiss/single-cell-python-training’s past year of commit activity
    HTML 3 CC-BY-4.0 0 0 0 Updated Apr 13, 2025
  • spatial-transcriptomics-training Public
    sib-swiss/spatial-transcriptomics-training’s past year of commit activity
    R 2 CC-BY-4.0 1 1 0 Updated Apr 13, 2025
  • cancer-variants-training Public
    sib-swiss/cancer-variants-training’s past year of commit activity
    Lua 5 CC-BY-4.0 2 0 0 Updated Apr 13, 2025
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