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Gene Set Enrichment Analysis in Python

Python 618 125 Updated Apr 1, 2025

Area-weighted venn-diagrams for Python/matplotlib

Jupyter Notebook 541 68 Updated Feb 25, 2025

My obsidian templates. Particularly useful for academic research.

9 Updated Mar 22, 2025

Insert and import citations, bibliographies, notes, and PDF annotations from Zotero into Obsidian.

TypeScript 1,221 61 Updated Aug 11, 2024

A wrapper for Taskwarrior, featuring a fancier output and local repositories workflow.

Python 8 Updated Oct 14, 2024

Google Calendar Command Line Interface

Python 3,401 319 Updated Jan 31, 2025

thunderlink replacement: Clickable, durable links to specific messages inside Thunderbird.

JavaScript 80 17 Updated Aug 6, 2024

Taskwarrior iOS interface app

Swift 11 1 Updated Mar 30, 2025

My experiences with & wishes for task management

12 Updated Dec 31, 2023

Personal task-tracking library

Rust 106 23 Updated Apr 12, 2025

Zero-copy MPI communication of JAX arrays, for turbo-charged HPC applications in Python ⚡

Python 475 31 Updated Mar 18, 2025

fabric is an open-source framework for augmenting humans using AI. It provides a modular framework for solving specific problems using a crowdsourced set of AI prompts that can be used anywhere.

Go 30,685 3,164 Updated Apr 14, 2025

finn is (not) napari

Python 3 1 Updated Apr 14, 2025

Open source electronic lab notebook (ELN) that helps you manage your laboratory work and stores all your experimental data in one place.

Ruby 267 103 Updated Apr 14, 2025

Plasmid editor and basic bioinformatic analysis in himena

Python 1 Updated Apr 8, 2025

The sync server for Taskchampion

Rust 97 16 Updated Apr 8, 2025

A data model for cell tracking with actions, undo history, and more!

Python 2 Updated Mar 25, 2025

Open Source Inventory Management System

Python 4,886 906 Updated Apr 15, 2025

The simplest, fastest repository for training/finetuning medium-sized GPTs.

Python 40,679 6,726 Updated Dec 9, 2024

Fully open reproduction of DeepSeek-R1

Python 23,928 2,183 Updated Apr 14, 2025

N-dimensional image registrations

Python 4 Updated Apr 7, 2025

An infinitely extensible and reusable application framework for data science.

Python 5 Updated Apr 15, 2025

Setup your RPI from scratch with one command!

168 24 Updated Nov 26, 2023

Imposition of Hard Convex Constraints on Neural Networks

Python 79 10 Updated Jan 18, 2024

Ansible is a radically simple IT automation platform that makes your applications and systems easier to deploy and maintain. Automate everything from code deployment to network configuration to clo…

Python 64,734 24,013 Updated Apr 14, 2025

Vector fields for instance segmentation.

Jupyter Notebook 7 4 Updated Jan 18, 2024

Image reading, metadata management, and image writing for Microscopy images in Python

Python 85 7 Updated Apr 11, 2025

Visualizing feature measurements on label images in napari

Python 7 Updated Aug 1, 2024
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